Uses of Class
uk.ac.vamsas.objects.utils.Mapping

Packages that use Mapping

uk.ac.vamsas.objects.utils

Uses of Mapping in uk.ac.vamsas.objects.utils

Methods in uk.ac.vamsas.objects.utils that return Mapping

Mapping

Mapping.intersectVisContigs(int[] viscontigs) return a new mapping object with a maplist modifed to only map the visible regions defined by viscontigs.

Methods in uk.ac.vamsas.objects.utils with parameters of type Mapping

boolean

Mapping.equals(Mapping other) Equals that compares both the to references and MapList mappings.

Constructors in uk.ac.vamsas.objects.utils with parameters of type Mapping

Mapping(Mapping map2)
create a duplicate (and independent) mapping object with the same reference to any SequenceI being mapped to.